RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

arcZ - ydfW.flxA.IGR interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ydfW.flxA.IGR arcZ IGR sRNA chr - 1647079 1647120 chr + 3350622 3350698 37 3.7
arcZ ydfW.flxA.IGR sRNA IGR chr + 3350641 3350657 chr - 1647050 1647078 87 11.0

arcZ reads

ydfW.flxA.IGR reads