RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

arcZ - lapB.pyrF.IGT interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
lapB.pyrF.IGT arcZ IGT sRNA chr + 1341742 1341858 chr + 3350662 3350698 67 7.3
arcZ lapB.pyrF.IGT sRNA IGT chr + 3350640 3350655 chr + 1341828 1341846 29 11.0

arcZ reads

lapB.pyrF.IGT reads