RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

arcZ - gcvT interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvT arcZ CDS sRNA chr - 3050494 3050575 chr + 3350669 3350698 143 11.6
arcZ gcvT sRNA CDS chr + 3350641 3350645 chr - 3050415 3050478 32 4.6

arcZ reads

gcvT reads