RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

arcZ - tnaC.tnaA.IGT interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
tnaC.tnaA.IGT arcZ IGT sRNA chr + 3888478 3888977 chr + 3350663 3350698 4179 19.7
arcZ tnaC.tnaA.IGT sRNA IGT chr + 3350621 3350667 chr + 3888479 3888577 90 4.5

arcZ reads

tnaC.tnaA.IGT reads