RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - wcaM.galF.IGR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
wcaM.galF.IGR gcvB IGR sRNA chr - 2114379 2114473 chr + 2942730 2942865 24 11.5
gcvB wcaM.galF.IGR sRNA IGR chr + 2942696 2942848 chr - 2114377 2114437 18 6.8

gcvB reads

wcaM.galF.IGR reads