RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - rmf interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rmf gcvB CDS sRNA chr + 1015678 1015904 chr + 2942879 2942974 1516 3.1
rmf gcvB CDS sRNA chr + 1015678 1015898 chr + 2942795 2942878 499 1.7
gcvB rmf sRNA CDS chr + 2942779 2942861 chr + 1015878 1015932 479 7.0

gcvB reads

rmf reads