RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - lldP.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
lldP.5UTR gcvB 5UTR sRNA chr + 3777288 3777367 chr + 2942717 2942875 173 2.1
gcvB lldP.5UTR sRNA 5UTR chr + 2942695 2942753 chr + 3777316 3777372 92 5.8

gcvB reads

lldP.5UTR reads