RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - fabI.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvB fabI.5UTR sRNA 5UTR chr + 2942695 2942776 chr - 1350992 1351070 63 2.4
fabI.5UTR gcvB 5UTR sRNA chr - 1351077 1351112 chr + 2942718 2942867 121 4.5

gcvB reads

fabI.5UTR reads