RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - ivbL interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ivbL gcvB CDS sRNA chr - 3852880 3852977 chr + 2942716 2942877 536 1.7
gcvB ivbL sRNA CDS chr + 2942693 2942778 chr - 3852878 3853010 390 2.1

gcvB reads

ivbL reads