RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - trpE interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
trpE gcvB CDS sRNA chr - 1322801 1322970 chr + 2942718 2942869 79 4.0
gcvB trpE sRNA CDS chr + 2942696 2942768 chr - 1322890 1322974 28 6.6

gcvB reads

trpE reads