RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - gdhA.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gdhA.5UTR gcvB 5UTR sRNA chr + 1842285 1842371 chr + 2942719 2942902 682 7.7
gcvB gdhA.5UTR sRNA 5UTR chr + 2942695 2942778 chr + 1842330 1842370 380 26.1

gcvB reads

gdhA.5UTR reads