RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - gdhA.5UTR interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gdhA.5UTR gcvB 5UTR sRNA chr + 1842303 1842376 chr + 2942719 2942878 115 2.3
gcvB gdhA.5UTR sRNA 5UTR chr + 2942696 2942775 chr + 1842329 1842370 190 11.8

gcvB reads

gdhA.5UTR reads