RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - ebgR interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvB ebgR sRNA CDS chr + 2942695 2942848 chr + 3221464 3221546 114 2.1
ebgR gcvB CDS sRNA chr + 3221436 3221478 chr + 2942724 2942775 27 4.0

gcvB reads

ebgR reads