RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - asd.EST5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvB asd.EST5UTR sRNA 5UTR chr + 2942696 2942770 chr - 3574879 3574896 68 2.7
asd.EST5UTR gcvB 5UTR sRNA chr - 3574906 3574939 chr + 2942718 2942777 102 3.7

gcvB reads

asd.EST5UTR reads