RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

micA - tig.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
tig.5UTR micA 5UTR sRNA chr + 455078 455148 chr + 2814825 2814878 30 12.0
micA tig.5UTR sRNA 5UTR chr + 2814801 2814836 chr + 455117 455163 18 6.1

micA reads

tig.5UTR reads