RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

micA - ompA.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompA.5UTR micA 5UTR sRNA chr - 1019802 1020188 chr + 2814800 2814896 4120 27.7
micA ompA.5UTR sRNA 5UTR chr + 2814800 2814837 chr - 1019738 1020135 795 6.5

micA reads

ompA.5UTR reads