RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

micA - nmpC interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
nmpC micA CDS sRNA chr - 576682 576777 chr + 2814828 2814877 59 5.3
micA nmpC sRNA CDS chr + 2814801 2814849 chr - 576620 576667 59 10.6

micA reads

nmpC reads