RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

micA - hupB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
micA hupB sRNA CDS chr + 2814799 2814851 chr + 461378 461768 952 3.4
hupB micA CDS sRNA chr + 461320 461744 chr + 2814822 2815036 2155 4.8

micA reads

hupB reads