RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

micA - greA.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
micA greA.5UTR sRNA 5UTR chr + 2814801 2814807 chr - 3328686 3328743 14 9.3
greA.5UTR micA 5UTR sRNA chr - 3328404 3328853 chr + 2814824 2814878 60 6.3

micA reads

greA.5UTR reads