RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

micL - acpP interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
micL acpP sRNA CDS chr - 1958483 1958520 chr + 1151602 1151671 78 13.1
acpP micL CDS sRNA chr + 1151551 1151669 chr - 1958440 1958497 305 32.1
acpP micL CDS sRNA chr + 1151684 1151846 chr - 1958441 1958475 81 3.3

micL reads

acpP reads