RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fnrS - yhbU interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
yhbU fnrS CDS sRNA chr + 3301447 3301477 chr + 1409169 1409247 64 8.3
fnrS yhbU sRNA CDS chr + 1409128 1409173 chr + 3301470 3301557 50 7.7

fnrS reads

yhbU reads