RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fnrS - trmJ interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
trmJ fnrS CDS sRNA chr - 2663307 2663363 chr + 1409156 1409250 62 5.8
fnrS trmJ sRNA CDS chr + 1409127 1409174 chr - 2663283 2663326 144 94.8
fnrS trmJ sRNA CDS chr + 1409184 1409209 chr - 2663286 2663317 37 11.4

fnrS reads

trmJ reads