RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fnrS - trmJ interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
trmJ fnrS CDS sRNA chr - 2663295 2663349 chr + 1409179 1409250 182 1.6
fnrS trmJ sRNA CDS chr + 1409127 1409210 chr - 2663182 2663324 1451 12.1

fnrS reads

trmJ reads