RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fnrS - fiu.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
fnrS fiu.5UTR sRNA 5UTR chr + 1409127 1409176 chr - 841478 841625 152 7.2
fiu.5UTR fnrS 5UTR sRNA chr - 841540 841576 chr + 1409150 1409175 49 12.4

fnrS reads

fiu.5UTR reads