RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fnrS - grxD.5UTR interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
grxD.5UTR fnrS 5UTR sRNA chr - 1734084 1734170 chr + 1409152 1409250 142 3.3
fnrS grxD.5UTR sRNA 5UTR chr + 1409127 1409153 chr - 1734079 1734155 72 6.9

fnrS reads

grxD.5UTR reads