RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fnrS - maeA interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
maeA fnrS CDS sRNA chr - 1555677 1555741 chr + 1409177 1409250 359 10.5
fnrS maeA sRNA CDS chr + 1409127 1409176 chr - 1555589 1555715 70 3.0

fnrS reads

maeA reads