RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - ygfZ interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ygfZ mgrR CDS sRNA chr + 3041494 3041567 chr - 1622817 1622847 124 43.6
ygfZ mgrR CDS sRNA chr + 3041585 3041837 chr - 1622818 1622868 33 6.3

mgrR reads

ygfZ reads