RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - ygdQ interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ygdQ mgrR CDS sRNA chr + 2970349 2970748 chr - 1622816 1622894 959 46.3
mgrR ygdQ sRNA CDS chr - 1622854 1622876 chr + 2970447 2970556 93 69.1
mgrR ygdQ sRNA CDS chr - 1622877 1622915 chr + 2970424 2970537 43 6.0

mgrR reads

ygdQ reads