RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - ygdQ interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ygdQ mgrR CDS sRNA chr + 2970333 2970720 chr - 1622817 1622888 381 75.7
mgrR ygdQ sRNA CDS chr - 1622862 1622915 chr + 2970412 2970561 52 32.1

mgrR reads

ygdQ reads