RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - ygdQ interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ygdQ mgrR CDS sRNA chr + 2970179 2970596 chr - 1622817 1622884 603 42.9
mgrR ygdQ sRNA CDS chr - 1622857 1622875 chr + 2970449 2970651 27 12.3

mgrR reads

ygdQ reads