RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - pitA interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
pitA mgrR CDS sRNA chr + 3637622 3638038 chr - 1622817 1622892 531 41.2
mgrR pitA sRNA CDS chr - 1622855 1622915 chr + 3637674 3637958 86 11.5

mgrR reads

pitA reads