RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - pqqL interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
pqqL mgrR CDS sRNA chr - 1575177 1575270 chr - 1622817 1622839 62 48.8
mgrR pqqL sRNA CDS chr - 1622855 1622914 chr - 1575114 1575202 14 10.5

mgrR reads

pqqL reads