RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - ompT interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompT mgrR CDS sRNA chr - 584781 584876 chr - 1622817 1622861 51 8.7
mgrR ompT sRNA CDS chr - 1622857 1622873 chr - 584782 584801 13 25.6

mgrR reads

ompT reads