RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - ompT interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompT mgrR CDS sRNA chr - 584779 584858 chr - 1622817 1622872 41 7.8
mgrR ompT sRNA CDS chr - 1622858 1622873 chr - 584778 584802 22 27.9

mgrR reads

ompT reads