RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - fabA interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
mgrR fabA sRNA CDS chr - 1622876 1622914 chr - 1016401 1016466 19 6.9
fabA mgrR CDS sRNA chr - 1016388 1016498 chr - 1622818 1622873 78 11.5

mgrR reads

fabA reads