RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

rmf - arcZ interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rmf arcZ CDS sRNA chr + 1015282 1015777 chr + 3350608 3350698 593 1.5
arcZ rmf sRNA CDS chr + 3350573 3350577 chr + 1015724 1015855 29 5.1

rmf reads

arcZ reads