RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

rplU.5UTR - ryhB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ryhB rplU.5UTR sRNA 5UTR chr - 3580978 3581018 chr - 3333381 3333490 62 4.0
rplU.5UTR ryhB 5UTR sRNA chr - 3333390 3333518 chr - 3580922 3580992 173 3.2

rplU.5UTR reads

ryhB reads