RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

spf - srlA.5UTR interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
srlA.5UTR spf 5UTR sRNA chr + 2825788 2825846 chr + 4049980 4050008 166 3.6
srlA.5UTR spf 5UTR sRNA chr + 2825788 2826064 chr + 4049922 4049973 304 9.9

spf reads

srlA.5UTR reads