RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

spf - tnaC.tnaA.IGT interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
tnaC.tnaA.IGT spf IGT sRNA chr + 3888190 3888677 chr + 4049923 4050008 535 8.0
tnaC.tnaA.IGT spf IGT sRNA chr + 3888681 3888777 chr + 4049926 4050009 48 2.6

spf reads

tnaC.tnaA.IGT reads