RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

spf - nanA interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
nanA spf CDS sRNA chr - 3373379 3373573 chr + 4049939 4050007 67 3.5
nanA spf CDS sRNA chr - 3372889 3373077 chr + 4049933 4049972 39 6.1

spf reads

nanA reads