RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

aegA - arcZ interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
arcZ aegA sRNA CDS chr + 3350641 3350663 chr - 2585411 2585518 33 5.1
aegA arcZ CDS sRNA chr - 2585433 2585549 chr + 3350608 3350698 226 24.6

aegA reads

arcZ reads