RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

pitA - mgrR interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
pitA mgrR CDS sRNA chr + 3637609 3638067 chr - 1622817 1622870 181 19.6
mgrR pitA sRNA CDS chr - 1622855 1622915 chr + 3637648 3637956 29 4.9

pitA reads

mgrR reads