RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

nlpD - dsrA interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
nlpD dsrA CDS sRNA chr - 2867409 2867849 chr - 2025222 2025287 1992 135.6
nlpD dsrA CDS sRNA chr - 2867899 2868120 chr - 2025223 2025285 16 6.4
dsrA nlpD sRNA CDS chr - 2025262 2025311 chr - 2867587 2867659 34 9.1

nlpD reads

dsrA reads