RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

napF - arcZ interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
napF arcZ CDS sRNA chr - 2303103 2303554 chr + 3350612 3350700 5265 20.4
arcZ napF sRNA CDS chr + 3350588 3350668 chr - 2303179 2303262 162 4.6

napF reads

arcZ reads