RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

yehS - sucD.EST3UTR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
yehS sucD.EST3UTR CDS 3UTR chr - 2212084 2212164 chr + 765082 765149 75 32.0
yehS sucD.EST3UTR CDS 3UTR chr - 2211988 2212072 chr + 765087 765149 25 6.1

yehS reads

sucD.EST3UTR reads