RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

rfbA - cpxP.3UTR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rfbA cpxP.3UTR CDS 3UTR chr - 2110896 2111215 chr + 4106352 4106387 55 10.7
rfbA cpxP.3UTR CDS 3UTR chr - 2110381 2110449 chr + 4106356 4106387 19 19.3

rfbA reads

cpxP.3UTR reads