RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

purU - gcvB interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
purU gcvB CDS sRNA chr - 1288588 1288677 chr + 2942789 2942872 174 9.0
gcvB purU sRNA CDS chr + 2942695 2942719 chr - 1288594 1288655 91 3.2

purU reads

gcvB reads