RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

otsB - cpxP.3UTR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
otsB cpxP.3UTR CDS 3UTR chr - 1981319 1981667 chr + 4106342 4106387 94 12.4
otsB cpxP.3UTR CDS 3UTR chr - 1982186 1982370 chr + 4106367 4106387 23 47.0
otsB cpxP.3UTR CDS 3UTR chr - 1981690 1982169 chr + 4106349 4106387 25 4.3

otsB reads

cpxP.3UTR reads