RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

marA - fnrS interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
fnrS marA sRNA CDS chr + 1409128 1409173 chr + 1619499 1619676 107 39.3
fnrS marA sRNA CDS chr + 1409127 1409176 chr + 1619682 1619936 36 3.5

marA reads

fnrS reads