RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

dps - raiA interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
dps raiA CDS CDS chr - 848800 848870 chr + 2737480 2737542 44 3.6
dps raiA CDS CDS chr - 848687 848912 chr + 2737402 2737476 89 9.6

dps reads

raiA reads